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SRX15731521: Pseudomonas aeruginosa strain PAK PexoS-mNeomGreen unsorted-EGTA input1
1 ILLUMINA (Illumina HiSeq X) run: 32.6M spots, 3G bases, 65.8Mb downloads

Design: Library prepared as described in Karash et al.,In Microbial Transposon Mutagenesis, pp. 3-15. 2019.
Submitted by: The University of Iowa
Study: Pseudomonas aeruginosa T3SS screen
show Abstracthide Abstract
Generating a comprehensive inventory of factors important for T3SS gene expression in Pseudomonas aeruginosa strain PAK. Transposon insertion libraries harboring T3SS fluorescent reporter were cultured under inducing conditions for T3SS gene expression and individual cells were sorted into T3SS-Off and T3SS-On populations on FACS. NexGen sequencing of the transposon insertion sites and comparison of the T3SS-Off and T3SS-On populations identified genes and small noncoding RNAs that playing a role in T3SS gene expression.
Sample: Pseudomonas aeruginosa T3SS screen
SAMN29146374 • SRS13424383 • All experiments • All runs
Library:
Name: PAKR1mNG
Instrument: Illumina HiSeq X
Strategy: Tn-Seq
Source: GENOMIC
Selection: PCR
Layout: SINGLE
Runs: 1 run, 32.6M spots, 3G bases, 65.8Mb
Run# of Spots# of BasesSizePublished
SRR1968265132,629,2133G65.8Mb2022-06-16

ID:
22374725

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